Clazz.declarePackage("J.export");
Clazz.load(["J.export.__RayTracerExporter"], "J.export._PovrayExporter", ["JU.Measure", "$.P4", "JV.Viewer"], function(){
var c$ = Clazz.decorateAsClass(function(){
this.haveMacros = false;
Clazz.instantialize(this, arguments);}, J["export"], "_PovrayExporter", J["export"].__RayTracerExporter);
Clazz.makeConstructor(c$, 
function(){
Clazz.superConstructor (this, J["export"]._PovrayExporter, []);
this.commentChar = "// ";
});
Clazz.overrideMethod(c$, "finalizeOutput", 
function(){
this.finalizeOutput2();
return this.getAuxiliaryFileData();
});
Clazz.overrideMethod(c$, "outputHeader", 
function(){
this.initVars();
this.output("// ******************************************************\n");
this.output("// Created by Jmol " + JV.Viewer.getJmolVersion() + "\n");
this.output("//\n");
this.output("// This script was generated on " + this.getExportDate() + "\n");
this.output("// ******************************************************\n");
try {
this.output(this.vwr.getWrappedStateScript());
} catch (e) {
if (Clazz.exceptionOf(e, Exception)){
} else {
throw e;
}
}
this.output("\n");
this.output(this.getJmolPerspective());
this.output("\n");
this.output("// ******************************************************\n");
this.output("// Declare the resolution, camera, and light sources.\n");
this.output("// ******************************************************\n");
this.output("\n");
this.output("// NOTE: if you plan to render at a different resolution,\n");
this.output("// be sure to update the following two lines to maintain\n");
this.output("// the correct aspect ratio.\n\n");
this.output("#declare Width = " + this.screenWidth + ";\n");
this.output("#declare Height = " + this.screenHeight + ";\n");
this.output("#declare minScreenDimension = " + this.minScreenDimension + ";\n");
this.output("#declare showAtoms = true;\n");
this.output("#declare showBonds = true;\n");
this.output("#declare noShadows = true;\n");
this.output("camera{\n");
var offsetX;
var offsetY;
var f;
if (this.wasPerspective) {
offsetX = this.vwr.tm.getTranslationXPercent() / 100 * this.screenWidth;
offsetY = this.vwr.tm.getTranslationYPercent() / 100 * this.screenHeight;
f = 1 / this.vwr.tm.getPerspectiveFactor((this.vwr.tm.getCameraDepth() - 0.5) * this.vwr.getScreenDim());
this.output("  perspective\n");
this.output("  angle " + this.apertureAngle + "\n");
this.output("  right < " + this.screenWidth + ", 0, 0>\n");
this.output("  up < 0, " + -this.screenHeight + ", 0 >\n");
} else {
offsetX = offsetY = f = 0;
this.output("  orthographic\n");
this.output("  right < " + -this.screenWidth + ", 0, 0>\n");
this.output("  up < 0, " + this.screenHeight + ", 0 >\n");
}this.output("  sky < 0, -1, 0 >\n");
this.output("  location < " + (this.screenWidth / 2 + offsetX) + ", " + (this.screenHeight / 2 + offsetY) + ", 0>\n");
this.output("  look_at < " + (this.screenWidth / 2 + f * offsetX) + ", " + (this.screenHeight / 2 + f * offsetY) + ", 1000 >\n");
this.output("}\n");
this.output("\n");
this.output("background { color rgb <" + this.rgbFractionalFromColix(this.backgroundColix) + "> }\n");
this.output("\n");
var distance = Math.max(this.screenWidth, this.screenHeight);
this.output("light_source { <" + this.lightSource.x * distance + "," + this.lightSource.y * distance + ", " + (-1 * this.lightSource.z * distance) + "> " + " rgb <0.6,0.6,0.6> }\n");
this.output("\n");
this.output("\n");
this.output("// ***********************************************\n");
this.output("// macros for common shapes\n");
this.output("// ***********************************************\n");
this.output("\n");
this.writeMacros();
});
Clazz.defineMethod(c$, "writeMacros", 
function(){
this.output("#default { finish {\n" + "  ambient " + this.gdata.getAmbientPercent() / 100 + "\n" + "  diffuse " + this.gdata.getDiffusePercent() / 100 + "\n" + "  specular " + this.gdata.getSpecularPercent() / 100 + "\n" + "  roughness .00001\n  metallic\n  phong 0.9\n  phong_size 120\n}}" + "\n\n");
this.output("#macro check_shadow()\n #if (noShadows)\n  no_shadow \n #end\n#end\n\n");
this.output("#declare slabZ = " + this.slabZ + ";\n" + "#declare depthZ = " + this.depthZ + ";\n" + "#declare dzSlab = 10;\n" + "#declare dzDepth = dzSlab;\n" + "#declare dzStep = 0.001;\n\n");
this.output("#macro clip()\n  clipped_by { box {<0,0,slabZ>,<Width,Height,depthZ>} }\n#end\n\n");
this.output("#macro circleCap(Z,RADIUS,R,G,B,T)\n// cap for lower clip\n #local cutDiff = Z - slabZ;\n #local cutRadius2 = (RADIUS*RADIUS) - (cutDiff*cutDiff);\n #if (cutRadius2 > 0)\n  #local cutRadius = sqrt(cutRadius2);\n  #if (dzSlab > 0)\n   #declare dzSlab = dzSlab - dzStep;\n  #end\n  cylinder{<X,Y,slabZ-dzSlab>,<X,Y,(slabZ+1)>,cutRadius\n   pigment{rgbt<R,G,B,T>}\n   translucentFinish(T)\n   check_shadow()}\n #end\n// cap for upper clip\n #declare cutDiff = Z - depthZ;\n #declare cutRadius2 = (RADIUS*RADIUS) - (cutDiff*cutDiff);\n #if (cutRadius2 > 0)\n  #local cutRadius = sqrt(cutRadius2);\n  #if (dzDepth > 0)\n   #declare dzDepth = dzDepth - dzStep;\n  #end\n  cylinder{<X,Y,depthZ+dzDepth>,<X,Y,(depthZ-1)>,cutRadius\n   pigment{rgbt<R,G,B,T>}\n   translucentFinish(T)\n   check_shadow()}\n #end\n#end\n\n");
this.writeMacrosFinish();
this.writeMacrosAtom();
this.writeMacrosBond();
});
Clazz.defineMethod(c$, "writeMacrosFinish", 
function(){
this.output("#macro translucentFinish(T)\n" + " #local shineFactor = T;\n" + " #if (T <= 0.25)\n" + "  #declare shineFactor = (1.0-4*T);\n" + " #end\n" + " #if (T > 0.25)\n" + "  #declare shineFactor = 0;\n" + " #end\n" + " finish {\n" + "  ambient " + this.gdata.getAmbientPercent() / 100 + "\n" + "  diffuse " + this.gdata.getDiffusePercent() / 100 + "\n" + "  specular " + this.gdata.getSpecularPercent() / 100 + "\n" + "  roughness .00001\n" + "  metallic shineFactor\n" + "  phong 0.9*shineFactor\n" + "  phong_size 120*shineFactor\n}" + "#end\n\n");
});
Clazz.defineMethod(c$, "writeMacrosAtom", 
function(){
this.output("#macro a(X,Y,Z,RADIUS,R,G,B,T)\n sphere{<X,Y,Z>,RADIUS\n  pigment{rgbt<R,G,B,T>}\n  translucentFinish(T)\n  clip()\n  check_shadow()}\n" + (this.isSlabEnabled ? " circleCap(Z,RADIUS,R,G,B,T)\n" : "") + "#end\n\n");
this.output("#macro q(XX,YY,ZZ,XY,XZ,YZ,X,Y,Z,J,R,G,B,T)\n quadric{<XX,YY,ZZ>,<XY,XZ,YZ>,<X,Y,Z>,J\n  pigment{rgbt<R,G,B,T>}\n  translucentFinish(T)\n  clip()\n  check_shadow()}\n#end\n\n");
});
Clazz.defineMethod(c$, "writeMacrosBond", 
function(){
this.output("#macro b(X1,Y1,Z1,RADIUS1,X2,Y2,Z2,RADIUS2,R,G,B,T)\n cone{<X1,Y1,Z1>,RADIUS1,<X2,Y2,Z2>,RADIUS2\n  pigment{rgbt<R,G,B,T>}\n  translucentFinish(T)\n  clip()\n  check_shadow()}\n#end\n\n");
this.output("#macro c(X1,Y1,Z1,RADIUS1,X2,Y2,Z2,RADIUS2,R,G,B,T)\n cone{<X1,Y1,Z1>,RADIUS1,<X2,Y2,Z2>,RADIUS2 open\n  pigment{rgbt<R,G,B,T>}\n  translucentFinish(T)\n  clip()\n  check_shadow()}\n#end\n\n");
});
Clazz.defineMethod(c$, "writeMacros2", 
function(){
this.output("#macro r(X1,Y1,Z1,X2,Y2,Z2,X3,Y3,Z3,R,G,B,T)\n triangle{<X1,Y1,Z1>,<X2,Y2,Z2>,<X3,Y3,Z3>\n  pigment{rgbt<R,G,B,T>}\n  translucentFinish(T)\n  clip()\n  check_shadow()}\n#end\n\n");
this.output("#macro p(X,Y,Z,R,G,B,T)\n box{<X,Y,Z>,<X+1,Y+1,Z+1>\n  pigment{rgbt<R,G,B,T>}\n  clip()\n  check_shadow()}\n#end\n\n");
this.output("#macro barb(X1,Y1,Z1,RADIUS1,X2,Y2,Z2,RADIUS2,R,G,B,T,X3,Y3,Z3,W3)\n cone{<X1,Y1,Z1>,RADIUS1,<X2,Y2,Z2>,RADIUS2\n  pigment{rgbt<R,G,B,T>}\n  translucentFinish(T)\n  clip()\n  clipped_by{plane{<X3,Y3,Z3>,W3}}\n  check_shadow()}\n#end\n\n");
this.haveMacros = true;
});
Clazz.defineMethod(c$, "getTriad", 
function(pt){
if (Float.isNaN(pt.x)) return "0,0,0";
return pt.x + "," + pt.y + "," + pt.z;
}, "JU.T3");
Clazz.defineMethod(c$, "getTriad", 
function(i){
return i[0] + "," + i[1] + "," + i[2];
}, "~A");
Clazz.defineMethod(c$, "color4", 
function(colix){
return this.rgbFractionalFromColix(colix) + "," + J["export"].___Exporter.translucencyFractionalFromColix(colix);
}, "~N");
Clazz.defineMethod(c$, "getAuxiliaryFileData", 
function(){
var fName = this.fileName.substring(this.fileName.lastIndexOf("/") + 1);
fName = fName.substring(fName.lastIndexOf("\\") + 1);
return "; Created by: Jmol " + JV.Viewer.getJmolVersion() + "\n; Creation date: " + this.getExportDate() + "\n; File created: " + this.fileName + " (" + this.getByteCount() + " bytes)\n\n" + (this.commandLineOptions != null ? this.commandLineOptions : "\n; Jmol state: (embedded in input file)\nInput_File_Name=" + fName + "\nOutput_to_File=true" + "\nOutput_File_Type=N" + "\nOutput_File_Name=" + fName + ".png" + "\nWidth=" + this.screenWidth + "\nHeight=" + this.screenHeight + "\nAntialias=true" + "\nAntialias_Threshold=0.1" + "\nDisplay=true" + "\nPause_When_Done=true" + "\nWarning_Level=5" + "\nVerbose=false" + "\n");
});
Clazz.defineMethod(c$, "output", 
function(pt){
this.output(", <" + this.getTriad(pt) + ">");
}, "JU.T3");
Clazz.overrideMethod(c$, "outputCircle", 
function(x, y, z, radius, colix, doFill){
this.output((doFill ? "b(" : "c(") + x + "," + y + "," + z + "," + radius + "," + x + "," + y + "," + (z + 1) + "," + (radius + (doFill ? 0 : 2)) + "," + this.color4(colix) + ")\n");
}, "~N,~N,~N,~N,~N,~B");
Clazz.overrideMethod(c$, "outputCone", 
function(screenBase, screenTip, radius, colix, isBarb){
if (isBarb) {
if (!this.haveMacros) this.writeMacros2();
this.tempP1.set(screenBase.x, screenTip.y, 12345.6789);
var plane = JU.Measure.getPlaneThroughPoints(screenBase, screenTip, this.tempP1, this.tempV1, this.tempV2,  new JU.P4());
this.output("barb(" + this.getTriad(screenBase) + "," + radius + "," + this.getTriad(screenTip) + ",0" + "," + this.color4(colix) + "," + plane.x + "," + plane.y + "," + plane.z + "," + -plane.w + ")\n");
} else {
this.output("b(" + this.getTriad(screenBase) + "," + radius + "," + this.getTriad(screenTip) + ",0" + "," + this.color4(colix) + ")\n");
}}, "JU.P3,JU.P3,~N,~N,~B");
Clazz.overrideMethod(c$, "outputCylinder", 
function(screenA, screenB, radius, colix, withCaps){
var color = this.color4(colix);
this.output((withCaps ? "b(" : "c(") + this.getTriad(screenA) + "," + radius + "," + this.getTriad(screenB) + "," + radius + "," + color + ")\n");
}, "JU.P3,JU.P3,~N,~N,~B");
Clazz.overrideMethod(c$, "outputCylinderConical", 
function(screenA, screenB, radius1, radius2, colix){
this.output("b(" + this.getTriad(screenA) + "," + radius1 + "," + this.getTriad(screenB) + "," + radius2 + "," + this.color4(colix) + ")\n");
}, "JU.P3,JU.P3,~N,~N,~N");
Clazz.overrideMethod(c$, "outputEllipsoid", 
function(center, radius, coef, colix){
var s = coef[0] + "," + coef[1] + "," + coef[2] + "," + coef[3] + "," + coef[4] + "," + coef[5] + "," + coef[6] + "," + coef[7] + "," + coef[8] + "," + coef[9] + "," + this.color4(colix);
this.output("q(" + s + ")\n");
}, "JU.P3,~N,~A,~N");
Clazz.overrideMethod(c$, "outputSurface", 
function(vertices, normals, colixes, indices, polygonColixes, nVertices, nPolygons, nTriangles, bsPolygons, faceVertexMax, colix, colorList, htColixes, offset){
if (polygonColixes != null) {
var isAll = (bsPolygons == null);
var i0 = (isAll ? nPolygons - 1 : bsPolygons.nextSetBit(0));
for (var i = i0; i >= 0; i = (isAll ? i - 1 : bsPolygons.nextSetBit(i + 1))) {
this.output("polygon { 4\n");
for (var j = 0; j <= 3; j++) this.outputVertex(vertices[indices[i][j % 3]], offset);

this.output("\n");
this.output("pigment{rgbt<" + this.color4(colix = polygonColixes[i]) + ">}\n");
this.output("  translucentFinish(" + J["export"].___Exporter.translucencyFractionalFromColix(colix) + ")\n");
this.output("  check_shadow()\n");
this.output("  clip()\n");
this.output("}\n");
}
return;
}this.output("mesh2 {\n");
this.output("vertex_vectors { " + nVertices);
for (var i = 0; i < nVertices; i++) this.outputVertex(vertices[i], offset);

this.output("\n}\n");
var haveNormals = (normals != null);
if (haveNormals) {
this.output("normal_vectors { " + nVertices);
for (var i = 0; i < nVertices; i++) {
J["export"].___Exporter.setTempVertex(vertices[i], offset, this.tempP2);
this.output(this.getScreenNormal(this.tempP2, normals[i], 1));
this.output("\n");
}
this.output("\n}\n");
}if (colixes != null) {
var nColix = colorList.size();
this.output("texture_list { " + nColix);
var finish = ">} translucentFinish(" + J["export"].___Exporter.translucencyFractionalFromColix(colixes[0]) + ")}";
for (var i = 0; i < nColix; i++) this.output("\n, texture{pigment{rgbt<" + this.color4(colorList.get(i).shortValue()) + finish);

this.output("\n}\n");
}this.output("face_indices { " + nTriangles);
var isAll = (bsPolygons == null);
var i0 = (isAll ? nPolygons - 1 : bsPolygons.nextSetBit(0));
for (var i = i0; i >= 0; i = (isAll ? i - 1 : bsPolygons.nextSetBit(i + 1))) {
this.output(", <" + this.getTriad(indices[i]) + ">");
if (colixes != null) {
this.output("," + htColixes.get(Short.$valueOf(colixes[indices[i][0]])));
this.output("," + htColixes.get(Short.$valueOf(colixes[indices[i][1]])));
this.output("," + htColixes.get(Short.$valueOf(colixes[indices[i][2]])));
}if (faceVertexMax == 4 && indices[i].length == 4) {
this.output(", <" + indices[i][0] + "," + indices[i][2] + "," + indices[i][3] + ">");
if (colixes != null) {
this.output("," + htColixes.get(Short.$valueOf(colixes[indices[i][0]])));
this.output("," + htColixes.get(Short.$valueOf(colixes[indices[i][2]])));
this.output("," + htColixes.get(Short.$valueOf(colixes[indices[i][3]])));
}}this.output("\n");
}
this.output("\n}\n");
if (colixes == null) {
this.output("pigment{rgbt<" + this.color4(colix) + ">}\n");
this.output("  translucentFinish(" + J["export"].___Exporter.translucencyFractionalFromColix(colix) + ")\n");
}this.output("  check_shadow()\n");
this.output("  clip()\n");
this.output("}\n");
}, "~A,~A,~A,~A,~A,~N,~N,~N,JU.BS,~N,~N,JU.Lst,java.util.Map,JU.P3");
Clazz.overrideMethod(c$, "outputSphere", 
function(x, y, z, radius, colix){
this.output("a(" + x + "," + y + "," + z + "," + radius + "," + this.color4(colix) + ")\n");
}, "~N,~N,~N,~N,~N");
Clazz.overrideMethod(c$, "outputTextPixel", 
function(x, y, z, argb){
if (!this.haveMacros) this.writeMacros2();
var tr = ((argb >> 24) & 0xFF);
tr = (255 - tr) / 255;
this.output("p(" + x + "," + y + "," + z + "," + this.rgbFractionalFromArgb(argb) + "," + tr + ")\n");
}, "~N,~N,~N,~N");
Clazz.overrideMethod(c$, "outputTriangle", 
function(ptA, ptB, ptC, colix){
if (!this.haveMacros) this.writeMacros2();
this.output("r(" + this.getTriad(ptA) + "," + this.getTriad(ptB) + "," + this.getTriad(ptC) + "," + this.color4(colix) + ")\n");
}, "JU.T3,JU.T3,JU.T3,~N");
});
;//5.0.1-v2 Mon Mar 04 12:59:58 CST 2024
