Clazz.declarePackage("J.jvxl.readers");
Clazz.load(["J.jvxl.readers.VolumeFileReader"], "J.jvxl.readers.PltFormattedReader", ["JU.SB", "JV.Viewer"], function(){
var c$ = Clazz.declareType(J.jvxl.readers, "PltFormattedReader", J.jvxl.readers.VolumeFileReader);
Clazz.makeConstructor(c$, 
function(){
Clazz.superConstructor (this, J.jvxl.readers.PltFormattedReader, []);
});
Clazz.overrideMethod(c$, "init2", 
function(sg, br){
this.init2VFR(sg, br);
this.isAngstroms = true;
this.jvxlData.wasCubic = true;
this.jvxlFileHeaderBuffer =  new JU.SB();
this.nSurfaces = 1;
}, "J.jvxl.readers.SurfaceGenerator,java.io.BufferedReader");
Clazz.overrideMethod(c$, "readParameters", 
function(){
var n1 = this.parseIntStr(this.rd());
var n2 = this.parseInt();
this.nPointsX = this.parseIntStr(this.rd());
this.nPointsY = this.parseInt();
this.nPointsZ = this.parseInt();
this.jvxlFileHeaderBuffer.append("Plt formatted data (" + n1 + "," + n2 + ") " + this.nPointsX + " x " + this.nPointsY + " x " + this.nPointsZ + " \nJmol " + JV.Viewer.getJmolVersion() + '\n');
this.volumetricOrigin.set(0, 0, 0);
var xmin = this.parseFloatStr(this.rd().substring(0, 12));
var xmax = this.parseFloatRange(this.line, 12, 24);
var ymin = this.parseFloatRange(this.line, 24, 36);
var ymax = this.parseFloatRange(this.line, 36, 48);
var zmin = this.parseFloatRange(this.line, 48, 60);
var zmax = this.parseFloatRange(this.line, 60, 72);
this.volumetricOrigin.set(xmin, ymin, zmin);
this.voxelCounts[0] = this.nPointsX;
this.voxelCounts[1] = this.nPointsY;
this.voxelCounts[2] = this.nPointsZ;
this.volumetricVectors[0].set(0, 0, (xmax - xmin) / this.nPointsX);
this.volumetricVectors[1].set(0, (ymax - ymin) / this.nPointsY, 0);
this.volumetricVectors[2].set((zmax - zmin) / this.nPointsZ, 0, 0);
});
});
;//5.0.1-v2 Mon Mar 04 12:59:58 CST 2024
